Oxygen plasma and HPM solution (mixtures of hydrochloric acid, hydrogen peroxide, and deionized water) were applied to cleaning the multilayer dielectric (MLD) pulse compressor gratings. X-ray photoelectron spectroscopy was carried out to evaluate surface cleanliness of the gratings. It is found that photoresist and fluorocarbon residues can be efficiently removed with oxygen-plasma cleaning and metal contaminants can be completely removed with HPM cleaning. After cleaning processes, the typical diffraction efficiencies in -1st reflected order are maintained larger than 95.0% at an incidence of 66.4 in TE polarization, and the laser induced damage threshold (LIDT) for 10-ps laser pulse at 1053 nm is greatly improved to 1.6 J/cm2. The cleaning method using oxygen plasma and HPM solution can efficiently make the surface clean and therefore enhance the LIDT of MLD gratings.